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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs61471148 chr6:28037032 T/A BTN3A2 chr6:26365387-26378548:+ -0.28 -6.11 2.12E-9 Box Plot
THCA rs61532544 chr20:15180351 GA/G MACROD2 chr20:13976015-16033842:+ 0.64 10.44 4.05E-23 Box Plot
THCA rs61543493 chr14:66818259 C/G ATP6V1D chr14:67761088-67826982:- 0.43 7.5 3.07E-13 Box Plot
THCA rs61545828 chr8:11795585 TTAAA/T SGK223 chr8:8175258-8244008:- -0.45 -8.46 3.27E-16 Box Plot
THCA rs615632 chr8:9796321 C/T SGK223 chr8:8175258-8244008:- 0.44 8.43 4.02E-16 Box Plot
THCA rs61567226 chr6:26364111 G/GA ZNF322B chr9:99957633-99961910:- -0.34 -6.07 2.62E-9 Box Plot
THCA rs61577108 chr7:140172603 T/A LOC441455 chr9:99488103-99489749:+ 0.46 6.24 9.84E-10 Box Plot
THCA rs61591637 chr2:132206364 A/T CCDC74B chr2:130896860-130902707:- 0.36 6.45 2.79E-10 Box Plot
THCA rs61612528 chr2:132213279 C/T CCDC74B chr2:130896860-130902707:- 0.38 6.8 3.14E-11 Box Plot
THCA rs61637448 chr2:132213735 AT/A CCDC74B chr2:130896860-130902707:- 0.38 6.86 2.12E-11 Box Plot
THCA rs61655621 chr6:116670145 G/T ECSIT chr19:11616731-11639989:- -0.23 -6.12 1.92E-9 Box Plot
THCA rs61680939 chr2:132206929 C/T CCDC74B chr2:130896860-130902707:- 0.36 6.22 1.1E-9 Box Plot
THCA rs61698517 chr5:170817947 C/CA CLEC2D chr12:9817565-9852151:+ -0.19 -6.21 1.13E-9 Box Plot
THCA rs61742093 chr6:27879982 A/G BTN3A2 chr6:26365387-26378548:+ -0.84 -12.05 2.21E-29 Box Plot
THCA rs61742093 chr6:27879982 A/G RNF5P1 chr8:38458179-38458718:- 0.72 6.36 4.62E-10 Box Plot